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	<title>Extended Phenotype &#187; Personal</title>
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		<title>Happy Thanksgiving to all!</title>
		<link>http://mark.madsenlab.org/2008/11/happy-thanksgiving-to-all.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/11/happy-thanksgiving-to-all.html#comments</comments>
		<pubDate>Thu, 27 Nov 2008 10:27:58 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Personal]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=506</guid>
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			<content:encoded><![CDATA[<p>I&#39;m sitting drinking coffee in what will be one of the last completely quiet moments for the next few days.&#0160; In a couple of hours friends and family will start arriving for two days of Thanksgiving food and fun.&#0160; In a few minutes I&#39;ll start preparing a few things, even though we&#39;re going to Steps tonight for Madden&#39;s island Thanksgiving and saving the &quot;big&quot; traditional dinner at my place for tomorrow.</p>
<p>But for now, the coffee is hot and strong, and the mountains of the Canadian coast range are visible to the north, with hints of blue sky to the west past Speiden Island.&#0160; It&#39;s a perfect autumn morning in the Northwest, at least from my perspective, and I&#39;m thrilled to be home to enjoy it.&#0160; It&#39;s been a whirlwind few weeks since the election and it&#39;s not going to get any less busy between now and Christmas.&#0160; </p>
<p>I bought a cider press this fall and have plenty of apples from C&#39;s orchard here on the island, and many more from Rebecca Moore&#39;s terrific farm (Blue Moon Farm) on Waldron Island. I still have plenty left to press, but the cider thus far is sweet, deeply flavored, but with great tartness and acidity.&#0160; I&#39;ve frozen a gallon already and hope to press-gang my friends into helping me squeeze more this weekend.&#0160; </p>
<p>I&#39;ll write more soon, but I just wanted to say Happy Thanksgiving to everyone reading out there.&#0160; Enjoy the day with friends and family!</p>
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		<title>Wild Boar Party Pictures</title>
		<link>http://mark.madsenlab.org/2008/07/wild-boar-party.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/07/wild-boar-party.html#comments</comments>
		<pubDate>Wed, 16 Jul 2008 14:04:00 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Personal]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=511</guid>
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			<content:encoded><![CDATA[<p>Just a quick post &#8212; pictures of last weekend&#8217;s party are online at <a href="http://www.flickr.com/photos/mmadsen">Flickr.</a>&nbsp; We began the event on Friday night at Steps Wine Bar and Cafe in Friday Harbor, where Chef (and good friend) Madden Surbaugh served 11 of us a spectacular tasting menu with venison, scallop-and-shrimp &quot;lollypops&quot; (watch for this on the upcoming menu), and Buffalo wing carrots (these were the hit of the evening, and are hard to describe but rocked).&nbsp; We drank Tempier Rose, the 1996 Classique, and a truly amazing magnum of the 1994 Tourtine, along with sparkling wine and a manzanilla sherry to start, with a late harvest Viognier to finish.&nbsp; </p>
<p>Saturday began at home with several of us doing another batch of black beans and getting the boar into my makeshift Alton Brown-style smoker (see pics, I&#8217;ll try to post a few more of the smoker itself).&nbsp; After 48 hours in the brine, I cold smoked the 33 pound boar for 8 hours with apple wood.&nbsp; I took advantage of the warm smoker box to also smoke 16 whole quail, which I then grilled to medium.&nbsp; </p>
<p>After a quick trip to the farmer&#8217;s market to pick up sugar snap peas, pay my bill on the previous week&#8217;s English peas, and pick up salad mix, we headed out to South Beach for a glorious early afternoon hike, swim, and a lunch on the beach.&nbsp; I served the quail quartered on a bed of Waldron Island salad greens, with local Quail Croft goat cheese, local strawberries, and a simple shallot vinaigrette.&nbsp; Tasty stuff.&nbsp; </p>
<p>By the time we got back to the house, it was time to fire up the pit with charcoal and dry hardwood, and as guests began arriving in the early evening we sandwiched the boar between diamond wire mesh and grilled it fast and hot (about an hour, maybe less).&nbsp; Served shredded and sliced, the boar was tender, smoky, and juicy &#8212; a big hit according to the diners.&nbsp; This was accompanied by rice, cuban black beans, fried plantains (done simply and as twice-fried tostones), and an ocean of Tavel rose, mojitos, and Hemingways (gin &amp; tonic with coconut water and angostura bitters).&nbsp; </p>
<p>As the visiting guests filtered home by around midnight, those of us staying at the house (Kim, Kris, Fran, Tina, and myself) collapsed with a cup of tea and some cookies and slept in Sunday morning, which was well earned on all our parts.&nbsp; In all, a perfect weekend and celebration of two terrific years on the island.&nbsp; I can&#8217;t wait to plan next year&#8217;s party, in fact.</p>
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		<title>Of Paradise Terrestre, Two Years Hence</title>
		<link>http://mark.madsenlab.org/2008/07/of-paradise-ter.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/07/of-paradise-ter.html#comments</comments>
		<pubDate>Wed, 09 Jul 2008 21:53:10 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Books]]></category>
		<category><![CDATA[Personal]]></category>
		<category><![CDATA[Travel]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=512</guid>
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			<content:encoded><![CDATA[<p>Next Monday &#8212; Bastille Day &#8212; marks two years since I packed up and moved north to San Juan Island. Much has changed in my life in the ensuing two years, but much that is important to me has stayed the same. Indeed, I feel increasingly as if I live and belong here, at long last.</p>
<p>Each spring, as I have for years now, I re-read Lawrence Durrell&#8217;s Reflections of a Marine Venus, whose opening page speaks so directly to me:</p>
<blockquote>
<p style="font: 12.0px Helvetica">Somewhere among the notebooks of Gideon I once found a list of diseases as yet unclassified by medical science, and among these there occurred the word Islomania, which was described as a rare but by no means unknown affliction of spirit. There are people, as Gideon used to say, by way of explanation, who find islands somehow irrestistable. The mere knowledge that the are on an island, a little world surrounded by the sea, fills them with an indescribable intoxication&#8230;.But like all Gideon&#8217;s theories it was an ingenious one. I recall how it was debated by candlelight in the Villa Cleobolus until the moon went down on the debate, and Gideon&#8217;s contentions were muffed in his yawns; until Hoyle began to tap his spectacles upon his thumbnail of his left hand, which was his way of starting to say goodnight&#8230;.Yet the word stuck; and though Hoyle refused its application to any but Aegean islands&#8230;.we all of us, by tacit admission, knew ourselves to be &#8216;islomanes.&#8217;</p>
<p style="font: 12.0px Helvetica"><strong>Lawrence Durrell</strong>, <em>Reflections on a Marine Venus</em></p>
<p style="font: 12.0px Helvetica"></p>
</blockquote>
<p>As I said, though the island provides constancy, friendship, and an abiding sense of peace and belonging, much has changed. I now travel down to Seattle on a weekly basis, to work at Gridnetworks and the UW campus. I gladly spend time in Seattle when it means I can see friends, family, and most especially T.</p>
<p>This weekend, in celebration of this anniversary in my life, I&#8217;ve invited friends and family to come up to the island, mingle with new Island friends, and eat terrific food and drink good wine. July in the islands seems to call for outdoor living and dining on the deck, as well as greater-than-ordinary culinary efforts. So I&#8217;m smoking and grilling a whole wild boar, from Broken Arrow Ranch in Texas, Cuban-style, and serving it with cuban black beans, rice, and fried plantains, accompanied by good rose, Chablis, and various red wines. I finished the fire pit for the boar roast today, and I&#8217;ll post pictures later this weekend. More soon.</p>
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		<title>The Perfect Manhattan and Other Adventures</title>
		<link>http://mark.madsenlab.org/2008/04/the-perfect-man.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
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		<pubDate>Sun, 20 Apr 2008 17:44:32 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Food]]></category>
		<category><![CDATA[Personal]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=516</guid>
		<description><![CDATA[
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			<content:encoded><![CDATA[<p>It&#8217;s been a good (if odd) weekend up here on the island, with snow on Friday and Saturday (though nothing like the convergence zone N. of Seattle where my brother lives), and brilliant sunshine (though cold weather) today. I&#8217;ve been working on dissertation stuff this weekend, honing my topic after a bit of a breakthrough last month, and trying to deal with domestic stuff (bills, learning how to maintain/flush/ignore the new septic system, finding a list of tile places to visit in Seattle for my upcoming bathroom remodel).</p>
<p>But I also went to the first farmer&#8217;s market of the season, and bought some great stuff. Tonight I&#8217;m going to make a roast chicken (currently brining its little juices out in the garage fridge), served with sauteed baby chard from Nootka Rose farm on Waldron Island, and I&#8217;m chilling out and reading some Rorty with Rebecca&#8217;s radishes from Blue Moon Farm on Waldron as well, along with several olive mixes, my homemade pickled vegetables, and the Perfect Manhattan.&nbsp; And by the way, Rebecca&#8217;s radishes are some of the best I&#8217;ve ever had &#8212; I&#8217;ve never described a radish as sweet and juicy, but these are just dripping with internal juice but still with a good bite.&nbsp; Dipped into sea salt they&#8217;re incredible.</p>
<p>I&#8217;ll get to the Manhattan later. First, I have to remember to recommend Vessel in Seattle. I&#8217;d hemmed and hawed about going in since it always seemed to be packed, but Madden and I hit the joint on a Monday night last week and immediately went nutty about the selection of rare, interesting, hard-to-find, and homemade items. They make their own bitters! The bartender responded to our boyish enthusiasm by immediately making us taste all the homemade bitters and herbal tinctures, and furthered the process of getting us thoroughly drunk which I&#8217;d begun by making Manhattans at the apartment and then having rose champagne and Charmes-Chambertin at Campagne. I recommend proceeding to Vessel at once and asking for anything made with their house-made bitters. Oh, and try the two vodkas from Sub Rosa in Oregon: saffron and tarragon. Madden preferred the saffron and I preferred the tarragon but both were stellar. Not sure they&#8217;re available up here commercially yet but I&#8217;ll find some.</p>
<p>Yesterday I ran across a bag of key limes at the store, just normal supermarket stuff, and thought, &quot;I should do preserved key limes, like preserved lemons.&quot; Madden is making preserved lemon marmalade on the new menu at Steps, and all three of my favorite olive mixes at PFI involve preserved lemons, so the idea of soaking citrus in salt for three weeks is pretty much in my wheelhouse. So I have a big jar of cross-cut key limes soaking in strong brine with bay leaves and black peppercorns. Sometime in early May I&#8217;ll figure out a use for these guys&#8230;.</p>
<p>But the original point of the post was to say that I&#8217;d finally perfected the Manhattan, at least from my standpoint. Long, long ago I worked hard on Martini making; in fact, that&#8217;s pretty much all I remember about my master&#8217;s degree. To this day, I keep a shaker and two glasses in the freezer, since thorough chilling of everything involved keeps the gin (yes, Martinis are made of GIN) from watering down when it hits the ice in the shaker (and a strict 5:1 ratio with good Noilly Prat vermouth or better should be observed).</p>
<p>But I digress. The perfect Manhattan turns out to involve replacing 1/3 or 1/4 of the sweet vermouth (again, Noilly Prat is my favorite, the Italians don&#8217;t make good vermouth, at least that we see over here) with a good dark Amaro. Amaros are Italian herbal bitters, the most common of which is Fernet Branca in the States. Fernet is a bit too dark and medicinal for this application, but you can do 1/5th Fernet for the same effect and keep more of the vermouth.</p>
<p>The absolute best Amaro for this job (and for drinking straight) is the Amaro Santa Maria al Monte, which comes into the Seattle area in miniscule quantities that you have to fight restaurants for. It&#8217;s gorgeous, herbal, complexly flavored stuff, and it gives the Manhattan a bit of an edge but nothing medicinal. In bars in Seattle, the lighter Amaro Nonino is more popular as a Manhattan addition but I think it&#8217;s too sweetly similar to the vermouth to be much use.</p>
<p>Well, it&#8217;s almost time to roast a chicken. More later.</p>
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		<title>Recent Food and Wine</title>
		<link>http://mark.madsenlab.org/2008/03/recent-food-and.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/03/recent-food-and.html#comments</comments>
		<pubDate>Sat, 15 Mar 2008 17:16:34 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Food]]></category>
		<category><![CDATA[Personal]]></category>
		<category><![CDATA[Wine]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=518</guid>
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			<content:encoded><![CDATA[<p>I&#8217;m slammed at the moment getting ready for an academic conference in a few weeks, so I haven&#8217;t had time to much lately outside work and research.&nbsp; But I did manage on Friday to take the afternoon off, and go to lunch with a regular group of friends at Nell&#8217;s.&nbsp; The group as a whole has met for 20 years, and I participate when I can (which isn&#8217;t nearly as often as I&#8217;d like).&nbsp; Phil cooks us lunch and we have the restaurant to ourselves.&nbsp; </p>
<p>Yesterday was &quot;Great 1980&#8217;s Wines&quot; as a theme, and the group dug reasonably deep and came up with some good stuff.&nbsp; My 1988 Raveneau Vaillons Chablis to start was slightly oxidized and we&#8217;ve all had better bottles; you win some and lose some.&nbsp; Highlights were the 1980 Jaboulet La Chapelle, which was mellow, pretty, but with some spice and weight left, the 1988 La Chapelle (superb), and a slightly advanced bottle of the 1989 Aldo Conterno Barolo Cicala (absolutely superb, despite being a little mature for its age).&nbsp; </p>
<p>Probably the wines of the day for me were the 1982 Montrose Bordeaux, of which I still had a bit left and am sipping on while I write this a day later.&nbsp; Incredible &#8212; beautiful Bordeaux nose, but lacking the brutality and tannins of the 1970 and 1990 Montrose, the latter of which probably won&#8217;t be ready to drink in my lifetime.&nbsp; </p>
<p>Tonight I&#8217;m having dinner (paella!) with another group of friends, and I&#8217;m bringing some old Spanish wines to go with the dinner, and a special appetizer.&nbsp; I don&#8217;t have the bottles in front of me here, but there are two 1976 Riojas, and a 1970 Marques de Riscal Rioja.&nbsp; I&#8217;m planning to finish things off with a 1910 Solera Pedro Ximinez sherry &#8212; a bunch of it hit the market some years back at very reasonable prices.</p>
<p>But the exciting thing for me will be an appetizer &#8212; a small slab of thinly sliced Jamon Iberico &quot;reserva&quot; &#8212; the fabled pinnacle of serrano hams, aged 24 months and only recently imported into the United States.&nbsp; I&#8217;ll let you google for the going rate on a whole leg of Jamon Iberico, but let&#8217;s just say that you can fly to Europe and eat it cheaper, probably.&nbsp; I have 4 precious ounces of the stuff, and I&#8217;m looking forward to sharing it with folks (and saving a little slice for Madden at Steps) tonight.</p>
<p>Then it&#8217;s back up the island to hunker down for a few days and bang out some simulation results.&nbsp; I&#8217;m doing most of my numerical work on Amazon EC2 clusters these days, so I don&#8217;t have to worry about where I am or whether I have computers available, which is sweet.&nbsp; I&#8217;ll post more after the old Riojas and the Jamon Iberico&#8230;</p>
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		<title>A Re-Updated Personal History of Personal Computing</title>
		<link>http://mark.madsenlab.org/2008/03/a-re-updated-pe.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
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		<pubDate>Tue, 11 Mar 2008 23:26:27 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Personal]]></category>
		<category><![CDATA[Technology]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=519</guid>
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			<content:encoded><![CDATA[<div class="entry-body">
<p>
Back in 2003 on my &quot;previous&quot; blog, and in early 2005 on this blog, I updated a long-standing essay I&#8217;d<br />
called &quot;A Personal History of Personal Computing.&quot; My first and second blogs are long<br />
gone in the transition away from Radio Userland to Typepad, but I think<br />
it&#8217;s time to reprint and update that essay (a second time). Moore&#8217;s law is one way to<br />
look at the history of personal computing. Another is the history of<br />
companies that have come and gone, making personal computers and<br />
software. Still another is a personal view. This story is about my own<br />
personal computing history &#8212; the machines, what I did with them, what<br />
software I thought was important. I omit computers that I didn&#8217;t really<br />
have control over, such as University mainframes and Unix servers, and<br />
I also omit the vast array of servers and computers I administered at<br />
RealNetworks, Internap, Network Clarity, and computers I used at Microsoft and now GridNetworks.</p>
<p>By my count, I&#8217;ve purchased 21 computers in my life, and of course used and worked with hundreds, if not thousands more (managing a Systems Engineering group will do that for you).&nbsp;  </p>
<p>
The story starts in the late 1970&#8217;s, shortly after personal computers came about and before IBM changed things forever&#8230;.&nbsp;
</p>
</div>
<div class="entry-more"></div>
<p><span id="more-519"></span></p>
<div class="entry-more">
<p>
<strong>TRS-80 Model I Level II 16K, cassette tape storage (1978-1980)</strong>
</p>
<p>
My first direct computer experience. The computer was owned by Kirkland<br />
Junior High school, and was the focus for a couple of years of a small<br />
group of enthusiasts after school under the direction of one of the<br />
math teachers (whose name, sadly, I&#8217;ve forgotten). We had the Level II<br />
upgrade but still only a tape drive (in the beginning &#8212; we later got a<br />
disk drive if I recall). I typed in the Star Trek game, and had a big<br />
box full of tapes of various programs. I had a copy of &quot;101 Basic<br />
Computer Games&quot; at the time (wish I&#8217;d kept it), and we played<br />
adventure, hunt the wumpus, all the classics. I did a bunch of simple<br />
Basic programming, and bought manuals for the Z-80 microprocessor and<br />
dreamed about doing assembly code. Since there was only one machine,<br />
most of the stuff we did was in a group, and it was tough to get time<br />
to hack around by myself in hex code, since it bored everybody else. I<br />
loved the TRS-80. It was my first.
</p>
<p>
<strong>Apple II+ (1980-1982)</strong>
</p>
<p>I didn&#8217;t own an Apple II or II+ personally until much later.<br />
Lake Washington High School had one, though, in addition to an old HP<br />
card punch machine of some type. I never paid much attention to the HP,<br />
however, because of the Apple. Long before I owned one, I had all of<br />
the Applesoft and Integer Basic manuals, as well as Don Lancaster&#8217;s<br />
books on great things you could do with the Apple (I still own one of<br />
the old Don Lancaster books). In addition, I somehow managed to glom<br />
onto a copy of the original Apple II &quot;red book&quot; &#8212; still a treasured<br />
part of my library. Somewhere around this point, my family was taking a<br />
vacation in California &#8212; San Francisco, and then driving to visit<br />
family in Fresno. I convinced Mom and Dad to detour to Cupertino, and I<br />
toured &#8212; no, I made a <em>pilgrimage</em> &#8212; to Apple and Atari.
</p>
<p>
<strong>Apple IIe (1983)</strong>
</p>
<p>
The first computer I personally owned was the Apple IIe, which came out<br />
in 1983. I had gotten a job at our local Albertson&#8217;s grocery store in<br />
1981 to save money to buy a computer (and later, a car). I cleaned the<br />
bakery and meat department, and eventually became a bag-boy (or<br />
whatever they&#8217;re now called in politically correct terms). I was going<br />
to buy a II+, but somebody at the Byte Shop (where I dragged my parents<br />
as often as humanly possible) told me about the upcoming IIe, and I<br />
pre-ordered one. When they came out, I got the first one that the shop<br />
received. I was in heaven. Disk drive! 80 columns! 48K RAM! Applesoft<br />
Basic! Naturally I pirated every piece of software that I could glom<br />
onto.
</p>
<p>Oddly, when I started college in 1984, I didn&#8217;t use the<br />
computer much for word processing, preferring to use my old typewriter<br />
instead. Why was that&#8230;.oh, that&#8217;s right, I didn&#8217;t own a printer! My<br />
interest in computers kind of waned for a few years as I plugged my way<br />
through college and a degree in anthropology (and nearly one in<br />
history).
</p>
<p>
<strong>Leading Edge XT clone (1988) [DOS]</strong>
</p>
<p>Before I left for grad school and while I was doing my senior<br />
honors thesis, I bought a new IBM PC clone to make my life easier. I&#8217;d<br />
been approved for a credit card, and the first thing I bought at<br />
Ballard Computer was a Leading Edge PC clone, on which I used<br />
WordPerfect 5.1. The Leading Edge stayed with me (including a cranky<br />
dot-matrix printer) through graduate school in Wisconsin and into the<br />
early 90&#8217;s. It was last seen sometime in the early 1990&#8217;s in the<br />
Thermoluminescence Laboratory at the University of Washington, where I<br />
left it so Jim Feathers could do word processing while calculating TL<br />
dates. There wasn&#8217;t any fancy software here. It was all about word<br />
processing &#8212; not even spreadsheets. I had Lotus 1-2-3 and some of the<br />
add-ons, but rarely used them for anything.
</p>
<p>
<strong>Macintosh SE (1988-1989), Macintosh II (various models, 1988-1989)</strong>
</p>
<p>While I was in Wisconsin I went back to my Apple roots and<br />
became a Macintosh convert, mostly thanks to my friend Carl Lipo and<br />
the fact that UWisconsin had a ton of Macs all over the place, so it<br />
was the dominant platform in our department as well as the school<br />
computer labs. I still did most of my core writing on the Leading Edge,<br />
but all of the scientific and programming exploration Carl and I did<br />
was on Macintosh. It was around this time (1988) that I also started<br />
using email, on BITNET. I&#8217;d had computer accounts at UWashington on the<br />
CDC Cyber and some of the VAX machines, but mostly to do SPSS<br />
statistics runs. Email for the general populace even on campus was<br />
still in the future prior to 1988, except in some lucky pockets. The<br />
big thing on software here was various graphing and statistics<br />
packages. We were/are archaeologists, and we finally had analytical<br />
power comparable to the Unix and mainframe-based stuff we&#8217;d been using<br />
before. Things like Surfer, for topographic mapping, were still fairly<br />
specialized, so we were using stuff on the Mac at this point even more<br />
primitive but still powerful.
</p>
<p>
<strong>Various 286 and 386 clones [DOS]</strong>
</p>
<p>Coming back to UWashington in 1990, our computer lab was mostly<br />
286 and 386 clones, running DOS and WordPerfect. By 1991, we were<br />
switching over to Windows, which Carl and I were heavily involved with.<br />
We also drove the upgrade of Macintosh capabilities, and the<br />
installation of a single 486 powerful enough to run some of the<br />
scientific software we were working with (e.g., CAD stuff). At this<br />
point, Carl and I were into all sorts of software, but the big thing<br />
was still word processing, spreadsheets for data, and stats programs. A<br />
few games, but I&#8217;d gotten away from games at this point. </p>
<p><strong>Macintosh<br />
Powerbook </strong></p>
<p>The department also bought a Powerbook, which could<br />
theoretically be checked out by students for fieldwork. In practice,<br />
Carl and I had this machine all the time, and I seemed to use it a lot,<br />
for working on my dissertation proposal either at Cafe Allegro, or at<br />
the Still Life in Fremont near our apartment (the former is still my<br />
favorite place to write, the latter is now gone).
</p>
<p>
<strong>Macintosh SE II (1992-1993)</strong>
</p>
<p>This was the first Macintosh I bought &#8212; my colleague Carl and I<br />
were starting work on the PGT/PG&amp;E pipeline project in 1992, and<br />
bought SE II&#8217;s in Eugene, Oregon (since there was no sales tax and<br />
that&#8217;s where the project office was). I carried this around for two<br />
years in a Mac soft carrying case through a zillion motels and offices<br />
along the pipeline route. I sold it to my friend Sarah Sterling in 1993<br />
when I bought my Centris 660AV. As far as I know, she may still have<br />
it, or at least did in the late 90&#8217;s <em>(2008 &#8211; I&#8217;m guessing not)</em>. I had an Apple Stylewriter with<br />
this, and still have the padded bag for the printer &#8212; it&#8217;s a perfect<br />
bag for wine tastings, holding a small box of glasses and miscellaneous<br />
whatnot.
</p>
<p>
<strong>486 clone (1992-1993) [Windows 3.11]</strong>
</p>
<p>This was my office computer on the pipeline project at Woods<br />
Cultural Research. It did very little, except Microsoft Word and Excel,<br />
but it was hooked up to the laser printer so I did my reporting work on<br />
it. Nothing impressive here.
</p>
<p>
<strong>Macintosh Centris 660AV (1993-1995)</strong>
</p>
<p>This was the dream machine I&#8217;d saved my per diem money for. I&#8217;d<br />
even given up my apartment in Bend, Oregon, and spent the last three<br />
months of my time on the pipeline project in a sleeping bag on the<br />
office floor and showering at the gym to save every last dime for this<br />
baby. Onboard DSP chips which gave me full-motion video capture, audio<br />
input and output, a decent size hard drive and memory, and one of the<br />
Apple Audiovision screens with microphone and speakers. And it cost a<br />
friggin&#8217; bundle, given Apple&#8217;s pricing model &#8212; between 3 and 4<br />
thousand if I recall. I still have this machine, in its boxes in the<br />
basement <em>(2008 note &#8211; this was finally junked when I moved to San Juan Island).</em> There&#8217;s a ton of stuff on the hard drive if it still runs,<br />
but of course none of it is relevant. This machine is where<br />
applications blossomed. The web, programming, statistics, simulation<br />
modelling. Metroworks Codewarrior opened whole new worlds for us in<br />
terms of agent-based simulations (this was before the Swarm toolkit).<br />
Early web stuff &#8212; BBedit, MacWeb, early versions of Netscape<br />
Navigator. Sadly, the migration to PowerPC and software that would only<br />
run on PPC made this machine obsolete. But this machine was my primary<br />
machine around the time I transitioned from grad school to RealNetworks<br />
(then Progressive Networks) and became a fulltime nerd.
</p>
<p>
<strong>Felix.law.washington.edu 486/66 (1994-1995) [Linux 1.09]</strong>
</p>
<p>Felix was the first Unix server I had root on. Bron Miller and I<br />
built Felix for the Law School at the University of Washington, to<br />
serve as a web server and email server. Given that the rest of the<br />
network was Novell Netware 3.11 with Windows 3.11 clients, we built<br />
Felix mostly for the experience and to have something flexible. Felix<br />
was retired sometime in the late 90&#8217;s when Bron got into the ASP<br />
environment and started working in NT. I learned a lot from Felix and<br />
owe a lot to that box, the law school, and Bron Miller, my partner in<br />
crime at that point.
</p>
<p>
<strong>Emergent Media&#8217;s servers (darwin, weismann, huxley) (1995-1997) [Linux/SunOS]</strong>
</p>
<p>When we started Emergent Media, Inc. in the spring and summer of<br />
1995, we had nothing in terms of web servers. Steve Patnode, who ran<br />
Outdoors Online at that point, was a consulting client of ours. He<br />
bought a Pentium box, and we ran both OOL and Emergentmedia.com on it<br />
for several years. That box was the original darwin, now defunct.<br />
Darwin lives on as darwin.pinpointvg.com, however <em>(2008 note &#8211; again, defunct)</em>. Weismann was our<br />
first &quot;wholly owned&quot; server, and we used it to serve hosted websites,<br />
and also did web and RealAudio streaming for Dan Savage&#8217;s website and<br />
radio show in 1996 and 1997. Weismann was a Pentium Pro 200, and lives<br />
on today as a hardened firewall box for my home network <em>(2008 update: after finally dying in early 2005, I replaced the original<br />
Weismann with a Netgear Pro VPN firewall, and Weismann&#8217;s hard drive with the Savage Love Live and original Toys in Babeland website is sitting in a box in my office)</em>. Huxley was a Sun Sparc 5,<br />
formerly owned by Point of Presence Company, with whom we were sharing<br />
space. Glenn Fleishmann had upgraded, and Huxley was basically<br />
worthless to him. We set it up for electronic commerce applications,<br />
and ran some of the OOL licensing sites from it for some period of<br />
time. I don&#8217;t know what happened to Huxley, but it probably is in a<br />
corner somewhere down at Allrecipes.com/Emergentmedia <em>(2008 note &#8211; undoubtedly defunct, given the sale of ARN to Reader&#8217;s Digest)</em>
</p>
<p>
<strong>Pentium 120 clone (1996) [Linux]</strong>
</p>
<p>I bought this P120 clone from Bear Computer in order to have a<br />
Linux box at home. I learned Java on this box, writing a pretty cool<br />
modular web server from scratch in the snowstorm over the holidays in<br />
1996/1997. It served as my only home box for a long time &#8212; after I<br />
moved into Fremont with my friend and coworker Jon Miller, I didn&#8217;t<br />
bother with the Centris anymore. This box was finally retired in 2000<br />
when I moved into my current house and replaced it with the &quot;current<br />
lineup.&quot; It lingered on in the &quot;parts bin&quot; at home and was highly<br />
useful for a source of stuff for fixing my Mom and aunt&#8217;s computers. </p>
<p>
<strong>Macintosh Powerbook Duo 120 (1996)</strong>
</p>
<p>
I don&#8217;t remember why I grabbed this, but Glenn Fleishmann sold me this<br />
for a pittance sometime in 1996, I think. At the time it was already<br />
old, slow, and didn&#8217;t really do anything. I think the keyboard was<br />
wonky or something, but it was fairly cheap. I don&#8217;t recall if I ever<br />
got it working much at all, and it long ago joined some junk pile.
</p>
<p>
<strong>IBM Thinkpad 560X 200MHz (1997) [Windows 95]</strong>
</p>
<p>I bought this laptop to be my personal machine sometime in early<br />
1997, after Emergent Media declared its first shareholder dividend<br />
based on our profits from doing MSN and Microsoft consulting. We were<br />
buying laptops for Internap, and moving into IBM Thinkpads at the time<br />
instead of the old Toshiba laptops for oncall. The 560X was a good<br />
machine, and served me well. I keep intending to reinstall something on<br />
it and put it down in the wine cellar to maintain inventory, but I&#8217;ve<br />
somehow lost the serial number of the recovery CD and can&#8217;t get the<br />
factory load to work. I could install something more modern on it, but<br />
it hasn&#8217;t been worth the time <em>(2008 update &#8211; completely defunct and junked some years ago)</em>
</p>
<p>
<strong>Pentium 500MHz [personal]</strong>
</p>
<p>I finally felt the need sometime in 2000 to get a Windows box to<br />
have at home alongside my Linux system, so this was another cheap Bear<br />
Computer special. It served the purpose of having Microsoft Office<br />
available (since I was managing people at that point and used Excel and<br />
Word a ton). I eventually gave this machine to one of my employees and<br />
upgraded to my current Windows system.
</p>
<p>
<strong>Dell Latitude CPx 600MHz (2000-current) [personal Linux]</strong>
</p>
<p>This was my Internap laptop (bacchus.internap.com) for a long<br />
time. INAP gave me the machine when I left, and it&#8217;s variously been my<br />
early Network Clarity machine, a &quot;loaner&quot; machine for new Network<br />
Clarity employees when Dell is slow shipping, and now it&#8217;s become my<br />
Redhat 8.0 test box. I love the new Redhat 8.0 install and look. I&#8217;m<br />
using this box as a clean place to build a Ruby development<br />
environment, to learn Ruby. I&#8217;ll probably also use it as a personal<br />
test box for Network Clarity&#8217;s software product. <em>(update July 2005:<br />
this machine is back to being my NC development box, now that the<br />
Inspiron 8200 developed motherboard/power supply connector problems &#8211; 2008 note:&nbsp; dead and junked when I moved to SJI).</em>
</p>
<p>
<strong>Pentium III 800MHz [home Linux]</strong><br />
<br /><strong>Pentium IV 1.4GHz [home windows]</strong>
</p>
<p>Behind the firewall box, my home configuration from 2000 to 2005<br />
was a Linux box with a ton of disk for music, a Windows box for doing<br />
word processing and presentations, a Turtle Beach Audiotron for playing<br />
the music, and Orinoco 802.11b gear for networking throughout the<br />
house.</p>
<p><em>(2008 update:&nbsp; the P3 800 MHz has been running continuously since 2000, and still houses a couple of storage disks I haven&#8217;t yet migrated old stuff from.&nbsp; This box is the most ancient computer I have functioning on a daily basis on the network.&nbsp; I&#8217;m quite sure its cost is now below a nickel per day).&nbsp; </em>
</p>
<p>
<strong>Sony Vaio Picturebook (Transmeta Crusoe) (2001-current) [travel]</strong>
</p>
<p>I bought the Vaio when it came out because it&#8217;s tiny (regular<br />
laptop width but only 4 inches across, less than 2 pounds). I also<br />
bought it because it runs the Transmeta chip, and I wanted to check<br />
that out. Also, my business partner Sam Long (Pinpoint Venture Group)<br />
bought one, and I had gear envy. The Vaio is great for traveling, but<br />
right now it&#8217;s honked up and won&#8217;t stay running without compulsively<br />
crashing. It&#8217;s a good enough travel computer that I do intend to have<br />
it serviced and XP installed. <em>(update July 2005: no real point anymore,<br />
but this was a very cool computer when it worked; 2008 &#8211; junked when I moved to SJI, and now replaced for travel by the Macbook Air).</em>
</p>
<p>
<strong>Dell Inspiron 8200 1.6GHz (2002-current) [work/personal Windows XP]</strong>
</p>
<p>The Dell 8200 was a superb personal and engineering laptop,<br />
which I bought when we started Network Clarity using the proceeds from<br />
selling my old Toyota pickup truck to Marc Olsen for use on Stuart<br />
Island (<em>where it still is, even in 2008</em>). It ran XP, which frankly is pretty damn<br />
great <em>(2008 note &#8211; huh, WTF?&nbsp; I must have been under the influence).</em> For the time, this laptop was performance-packed: 1.6GHz<br />
processor, 1GB RAM, big HD, DVD/CDRW, wireless, 100MB ethernet,<br />
firewire, and an ultra-bright 15&quot; display. Eats the new 90w batteries<br />
for breakfast, but with two batteries I also get nearly 5 hours of<br />
life. If I&#8217;m willing to drag 8-9 pounds around on my shoulder. This<br />
machine has a ton of development environments, multimedia, UML<br />
diagramming tools, databases, competitor products, and whatnot. </p>
<p>
<strong>Dell Inspiron 8500</strong>
</p>
<p>
Well, since I first posted this story, the 8200 stopped charging<br />
batteries, which became something of a problem if you travel. So I<br />
bought an 8500 from eBay (brand-new, never been used). This became my<br />
standard Windows laptop, and it&#8217;s pretty nice. Thinner, lighter, and<br />
with a wide aspect screen, it&#8217;s also faster than the 8200. As of July<br />
2005, this remains my Windows laptop, although not my primary machine<br />
given my new Powerbook <em>(2008 note &#8211; again, dead as a door nail.&nbsp; Dell is good for business laptops, but the lifetime ain&#8217;t great)</em>
</p>
<p>
<strong>Fry&#8217;s Special PC for $199</strong>
</p>
<p>When the &quot;home windows box&quot; mentioned above died early in 2005,<br />
I went to Fry&#8217;s and bought one of their $199 specials, a Chinese-built<br />
Sempron box with 128MB of RAM (which I upgraded) and a 40GB drive. The<br />
thing ran Lindows when I first got it, which was &quot;cute,&quot; but was soon<br />
replaced with Ubuntu Linux, and now serves as an &quot;up to date&quot; Linux box<br />
in my home network. The older 800MHz box is still the major file<br />
server, but the fans are starting to sound bad and the disks almost<br />
full, and it needs work soon.</p>
<p><em>(2008 update:&nbsp; this machine still serves as a Subversion repository on my home network on San Juan &#8212; an incredible value, running about 23 cents per day now and falling&#8230;.)</em> </p>
<p>
<strong>Apple Powerbook 12&quot; 1.0GHz/768MB RAM/60GB/Tiger OS X 10.4</strong>
</p>
<p>
This is the latest acquisition, as regular readers know. I love this<br />
machine, and love the fact that I&#8217;ve come back to Apple after nearly a<br />
decade of non-use. Prices are finally getting into the zone where it&#8217;s<br />
rational to buy their hardware, and OS X is finally maturing into a<br />
very sweet operating system, with a Unix core which makes long-time<br />
Unix/Linux people happy while still providing an amazing GUI<br />
experience. I believe I&#8217;ll be staying on Apple for personal machines<br />
for the foreseeable future, using Windows when needed and having Linux<br />
servers at home for storage and playing around.
</p>
<p>That&#8217;s about it. These are the machines in my life, that are my<br />
own personal computing history. The requirements keep going up, but<br />
I&#8217;ll never forget the simple pleasures of the TRS-80 or my first Apple<br />
IIe&#8230;.. What does the future hold? I&#8217;m hoping to centralize all my<br />
disk storage on the network at home, and create some redundancy (I have<br />
a DLT tape drive but I hate the thought of doing tape backup at home).</p>
<p><em>(2008 note &#8211; this machine still is in use, but I gave it to dear friends up on Saltspring Island when I bought my MBP)</em></p>
<p><strong>Macbook Pro 17inch &quot;Number One&quot;</strong></p>
<p>This was bought in the Spring of 2006, right after the &quot;glossy screen&quot; option came out along with Core Duo processors, and it instantly became my only personal machine.&nbsp; This machine only runs with 2GB RAM, so it&#8217;s a bit tight given everything I run, including virtual machines with Parallels.&nbsp; I gutted the optical drive out of it within a year and installed a second hard drive for extra storage, which got me into trouble with Apple when I needed repairs for the &quot;magical expanding battery&quot; problem.&nbsp; The upshot is that this became my &quot;backup&quot; laptop, and I keep it updated and ready to Target Disk Mode as my backup should the next machine crap out&#8230;.</p>
<p><strong>Macbook Pro 17inch &quot;Number Two&quot; (aka The Current Machine)</strong></p>
<p>This was bought when the guy at the Apple Store pissed me off by getting righteous about my optical/disk modifications of &quot;Number One&quot; and wouldn&#8217;t give me a repair estimate and was going to leave me without a computer for days or weeks.&nbsp; So I bit the bullet and bought backup/new primary hardware, and I&#8217;m still using it.&nbsp; This one has the 3GB RAM limit, but the Core 2 Duo, and the matte screen (since I found the glossy screen difficult to use sitting in sunlight outside, on the deck or sitting on the beach &#8212; life&#8217;s rough, huh?).&nbsp; This is currently my daily machine both at GridNetworks and for academic use, and it&#8217;s pushed to the hilt.&nbsp; Disk is nearly full, RAM is almost always short, but it works well and I&#8217;d be lost without it (hence the &quot;backup&quot; laptop).&nbsp; </p>
<p><strong>Macbook Air</strong></p>
<p>I bought the Macbook Air simply because I couldn&#8217;t stop myself.&nbsp; Steve Jobs was still on stage during the keynote, and I found myself filling out the form on the Apple Store.&nbsp; It was hypnotic, and I still am not sure how it happened.&nbsp; The Air is my &quot;couch&quot; laptop, so I can leave the 17inch on the desk playing music, etc, and have something portable and small on my lap for &quot;light&quot; work, Wikipedia reading, writing, email, etc.&nbsp; Plus it&#8217;s fun to take to meetings.&nbsp; For the first 10 days I really did carry it in a manila envelope because they hadn&#8217;t shipped anything that fit it yet.&nbsp; </p>
<p><strong>Mac Mini</strong></p>
<p>Oh, I almost forgot the Mac Mini.&nbsp; The Mini is my stereo, under the kitchen island at the house, connected to the monitor that swivels over the island.&nbsp; I keep zero files or software on it, it&#8217;s pretty much a stock Leopard load, and its job is to pull iTunes off the Infrant NAS storage server and let me read email and browse the web while downstairs.&nbsp; And keep friends entertained with YouTube and FunnyOrDie while we&#8217;re cooking.</p>
<p><strong>Dell Dimension 9200</strong></p>
<p>And I nearly forgot the simulation workhorse.&nbsp; I bought a fairly cheap Dell desktop, the Dimension 9200 with decent graphics card, 2GB RAM, and the Core 2 Duo, in fall of 2006 or so.&nbsp; I think.&nbsp; I use it as a Linux box in the office at home, on which I do development, and run simulations in batch mode for research purposes.&nbsp; A good deal, all things considered.
<p>&nbsp;</p>
</div>
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		<title>Why I&#8217;m Caucusing for Obama</title>
		<link>http://mark.madsenlab.org/2008/02/why-im-caucusin.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/02/why-im-caucusin.html#comments</comments>
		<pubDate>Sat, 09 Feb 2008 00:59:43 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Current Affairs]]></category>
		<category><![CDATA[Personal]]></category>
		<category><![CDATA[Politics]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=521</guid>
		<description><![CDATA[
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			<content:encoded><![CDATA[<p>I&#8217;ve been mostly silent here on the subject of politics for awhile. There are any number of reasons for this, mostly practical &#8212; time, and other priorities. But at least part of my reticence comes from a feeling, in retrospect, like I&#8217;ve been holding my breath in anticipation. Not necessarily over the Democrats&#8217; chances this year; I think they&#8217;re good (but definitely not a lock, now that McCain is the defacto nominee).</p>
<p>I&#8217;ve been holding my breath, I think, hoping that the &#8220;practicalities of winning&#8221; don&#8217;t overwhelm this election far too early. Ever since a mostly-unknown Barack Obama stood up in Boston at the 2004 Democratic National Convention and delivered the <a href="http://www.americanrhetoric.com/speeches/convention2004/barackobama2004dnc.htm">most stunning political speech of my lifetime</a> (I&#8217;m too young for JFK), there&#8217;s been the possibility of idealism this time around.</p>
<p>Politics, at least in my adulthood, has been a grim, pragmatic affair, split by dry-as-dust tinkering in the boiler room of the Great Society welfare state for Democrats, and rigid adherence to a set of litmus tests among Republicans aimed at enforcing ideological purity on tax cuts, guns, and abortion. Politics has been thoroughly computerized, mapped, analyzed like baseball box scores and run by experts on polling, advertising, demographics, and mass fundraising. In other words, it&#8217;s a gigantic commercial ecosystem, and both sides increasingly treat it that way.</p>
<p>Obama has seemed, since his declaration became all but inevitable last year, like our generation&#8217;s best hope for short-circuiting the wiring of the increasingly robotic Body Politic, and perhaps &#8212; even if in small ways &#8212; re-envisioning the rules of the game. Perhaps even re-imagining them in ways which cross-cut, and thus defuse, the power of our current definitions of &#8220;red&#8221; and &#8220;blue.&#8221;</p>
<p>Naturally, Obama&#8217;s relative youth has laid him open, on both sides of the aisle, to those who wonder about his toughness, his experience, his ability to win. Once the primary campaigning got seriously underway, moreover, it has seemed like Obama hasn&#8217;t lived up to his 2004 performance. Early debates showed him quiet, almost deferential, and he left us underwhelmed. Polls showed Clinton with an early and massive lead, and one had to wonder, as recently as the holidays, whether it truly was the case that Obama needed more time and experience before running. A series of fairly lackluster press events and appearances have done little to change that impression.</p>
<p>I have to admit that despite never wanting anyone else as nominee, I have fallen prey to all of these species of doubt and skepticism, and probably a few others.</p>
<p>No longer. I don&#8217;t know whether Obama will make it and become our nominee, but I think it&#8217;s very possible. Nothing magical has happened, except for one thing: he&#8217;s made it thus far, all the way through Super Tuesday, and his momentum does seem to be building.</p>
<p>But the uphill climb is seeming more and more like a social movement, and less like a political campaign. Obama&#8217;s message of change is largely in the eye of the beholder, but it resonates precisely because much of the voter base today has only experienced the type of politics I described above. We want something more. We&#8217;re all slightly cynical about the ability of politics and government to change anything for the better; some of us are much more than slightly cynical. In part, our generation&#8217;s growing flirtation with libertarian economics and even politics stems from this disillusionment with government.</p>
<p>Some of that disillusionment is quite proper; we are the inheritors of a New Deal and Great Society that turned out to have noble goals but often methods that were flawed, either in the short or long terms. We are also the inheritors of the social world created when the Supreme Court short-circuited a slowly developing social consensus, as they did with Roe v. Wade, and handed a minority of the nation a rallying cry that would drive judicial nomination and set much of the political landscape for a generation.</p>
<p>That landscape now seems frozen and unalterable. Acquiescence in, and intimate knowledge of, this landscape, is now the mark of a &#8220;serious&#8221; politician or staffer. An entire industry of political staffers, pollsters, lobbyists, advisors, and of course politicians have a vested interest in that landscape, since knowledge of it is crucial to their employability or electability.</p>
<p>Obama may or may not be serious about changing that landscape, and even if he is successful in beating the odds and securing the nomination, as well as winning the general election, he may only succeed in making small alterations. But the chance &#8212; just the chance &#8212; that we may see something other than the politics of &#8220;culture war,&#8221; or the politics of &#8220;triangulation&#8221; &#8212; both manifestations of a politics of cynicism &#8212; during our lifetime, makes it well worth supporting his campaign.</p>
<p>We deserve something more from our collective efforts at self-government, and although we might not get it during the next President&#8217;s term, a social movement starts somewhere, somehow. Social changes always start out as small, seemingly fragile things, laughed at by the &#8220;grownups&#8221; who know &#8220;how the world works&#8221; and label anything but the status quo as &#8220;impractical&#8221; or simply sheer nonsense. In retrospect, of course, social changes always seem inevitable, when observed through the lens of history, growing seemingly logically out of preceding conditions given our knowledge of the outcome.</p>
<p>In the hazy middle, when those who laughed or ignored it in its early stages are caught short, and forced by the size of the crowds or vote counts to wonder whether a movement or change should be taken seriously, is the crucial moment. The moment when growth could feed on itself, or fizzle out. A moment when a little extra support and encouragement could make all the difference to whether a social movement succeeds in changing the way we think, and act.</p>
<p>That&#8217;s why I&#8217;m supporting Barack Obama, with a vote on my primary ballot, at the caucuses tomorrow, with donations, and hopefully on November&#8217;s ballot. And it&#8217;s why I hope you will as well.</p>
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		<title>My new Macbook Air arrived!</title>
		<link>http://mark.madsenlab.org/2008/02/my-new-macbook.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/02/my-new-macbook.html#comments</comments>
		<pubDate>Mon, 04 Feb 2008 19:55:26 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Personal]]></category>
		<category><![CDATA[Technology]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=522</guid>
		<description><![CDATA[
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			<content:encoded><![CDATA[<p>OK. I&#8217;m going to gush a bit. Whatever its faults, and however often Apple displays a contempt for customers (and believe me, anytime I want something outside the narrow box they sell, I&#8217;ve experienced it), sometimes they connect with the pitch and hit it straight out of the park.</p>
<p>It&#8217;s a simple thing these days to do just-in-time manufacturing and shipping from China, and I wasn&#8217;t expecting my Macbook Air until Feb. 12. But Apple pulled the shipping date <span style="font-style: italic;">in</span> by a week, and was going to deliver it on Feb. 6th. I was thrilled.</p>
<p>It arrived this morning. Sure, it&#8217;s not that complex, but boy, do they know how to make a tech geek happy. The packaging is gorgeous &#8212; a coworker said it reminded him of a Tiffany&#8217;s box. Even the Apple skeptics in the office &#8212; the dyed-in-the-wool, live-in-Redmond-even-though-they-don&#8217;t-work-at-Microsoft types, were drooling just a little bit. When they thought I wasn&#8217;t looking. They know who they are, and today I can see that their snide comments about Apple and the Cult of Steve are just envy wrapped in sarcasm.</p>
<p>Then you unpack it, and the Air feels both lighter and more substantial than you expect. The screen is terrific, the keyboard very nice, and the overall experience is exactly what I hoped a subnotebook from Apple would be. Even the &#8220;Remote CD/DVD&#8221; thing works perfectly for installing software &#8212; although I bought an external Superdrive, mostly because the remote thing doesn&#8217;t work well for playing DVD&#8217;s due to the copy protection schemes.</p>
<p>I&#8217;m sure after a couple of days or a week of using the machine daily I&#8217;ll have the usual list of gripes, wishes, etc. But not today. Today I&#8217;m sitting on the sofa, having loaded LaTeX, Office 2008, and a few other essentials, and just enjoying that &#8220;first day&#8221; experience.</p>
<p>Wow. Bravo Apple.</p>
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		<title>Screen sharing in OS X Leopard</title>
		<link>http://mark.madsenlab.org/2008/01/screen-sharing.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/01/screen-sharing.html#comments</comments>
		<pubDate>Mon, 21 Jan 2008 17:24:18 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Personal]]></category>
		<category><![CDATA[Technology]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=523</guid>
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I have to say, lately I&#8217;ve been using screen sharing in Leopard a great deal, to work more flexibly around the house.  This isn&#8217;t much of a concern in Seattle, since my apartment is small enough that I rarely have to move my laptop at all, but at home on the island, I often find myself wanting to work from the living room or by the windows, but not wanting to interrupt some long process I&#8217;ve got running over wired ethernet.  So I leave my machine where it is, and use a different machine to work from downstairs via screen sharing.  No more copying files around, worrying about having every application on every computer, synchronization issues, etc.
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<p>
Of course, I used to use VNC for this in a limited fashion prior to Leopard, but the way Apple has integrated this into the Finder networking list and with account security is very nice.
</p>
<p>
And, when my Macbook Air arrives in February, I can really move around, but without worrying whether I can do &#8220;heavy&#8221; work given the smaller hard drive and memory footprint, since the Air can be just a light &#8220;terminal&#8221; for a larger machine.
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<p>
I know, not problems that most people have, but it&#8217;s a nice feature of Leopard that I&#8217;m coming to really appreciate.</p>
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		<title>Sunday Night Windstorm, and What I&#8217;m Doing and Studying</title>
		<link>http://mark.madsenlab.org/2008/01/sunday-night-wi.html#utm_source=feed&amp;utm_medium=feed&amp;utm_campaign=feed</link>
		<comments>http://mark.madsenlab.org/2008/01/sunday-night-wi.html#comments</comments>
		<pubDate>Sun, 20 Jan 2008 20:14:31 +0000</pubDate>
		<dc:creator>mark</dc:creator>
				<category><![CDATA[Anthropology]]></category>
		<category><![CDATA[Biology]]></category>
		<category><![CDATA[Books]]></category>
		<category><![CDATA[Evolutionary theory]]></category>
		<category><![CDATA[Personal]]></category>
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		<category><![CDATA[Science]]></category>

		<guid isPermaLink="false">http://mark.madsenlab.org/?p=524</guid>
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			<content:encoded><![CDATA[<p>
I just came in from standing on the deck, under clear skies, a partial moon, and the most amazing windstorm.  The moon made visible the big waves crashing on the rocks below me, and the whitecaps out in the channel.  It&#8217;s been blowing hard all day, without cease, and I&#8217;m happy to be inside with a wood stove and food on the stove.  A brief respite at home before another stretch at the office.  I haven&#8217;t quite figured out the optimal amount of time to spend down in Seattle, but I&#8217;m pretty sure it&#8217;s shorter than I&#8217;ve been spending as things heat up at work.  Seeing friends and doing things in Seattle is great, but I miss the island.  The slow process of meeting people and &#8220;becoming a local&#8221; has all but stopped as I commute back and forth.
</p>
<p>
I haven&#8217;t written much here since late December, but only because life has reached a fever pitch again, and the brief times I have free away from a full schedule need to be devoted to research and my dissertation, not idle contemplation for my website.  But we&#8217;re in the thick swamp of an election season, unseasonably early of course, and I haven&#8217;t written anything about the candidates, the primaries, the debates, as I did for much of 2004.  I can&#8217;t promise to get back to regular posting before Super Tuesday, but I hope to soon thereafter.  Or as soon as I can get my two projects more firmly underway (one paper, one poster) for the SAA (Society for American Archaeology) meetings in late March in Vancouver.  Both are co-authored with Alex Bentley and Carl Lipo, and we&#8217;re working on the statistical consequences of expressing formal models of cultural transmission within realistic social networks.
</p>
<p>
For those unfamiliar with cultural transmission, this is the observation that humans are not born with a hard-coded set of cultural behaviors (in the sense of genetically transmitted) but learn, over the course of child development and throughout life, ways of behaving and believing and thinking through interaction with others in our social groups. In a formal sense, cultural transmission is modeled mathematically through analogues of haploid population genetics models (Wright-Fisher and Moran processes), replicator dynamics and allied models from evolutionary game theory, and the contact and voter models in the study of &#8220;interacting particle systems&#8221; or spatial stochastic processes by probability theorists and statistical physicists.  An open question, whose likely answer is &#8220;yes,&#8221; is that these methods of modeling cultural learning and transmission are formally equivalent, given appropriate variations of population structure and the focus on deterministic versus stochastic models.  But more of that in future posts, hopefully.
</p>
<p>
Basically, I&#8217;m working with some collaborators studying models of social learning and communication, for predictive ensemble or spatial statistical &#8220;signatures&#8221; in cultural data which are mapped spatially and dated temporally.  A &#8220;signature&#8221; would be a unique pattern of statistical properties which tells us how a given population was structured (in terms of social networks) given the results of how cultural information flowed within the population, and came to be reflected in material objects or artifacts.  An example would be a model in which we learn about, and adopt, preferences for songs and music from our social network of friends, but in an unbiased fashion &#8212; we occasionally adopt the preferences of a colleague or associate.  What statistical properties does this local process of imitation have, when projected into a &#8220;global&#8221; perspective &#8212; statistical patterns within a population, spatial patterns in kinds of data we can map and chart?
</p>
<p>
Of course, we all know that the model I just described is pretty simplistic.  Nobody &#8220;just copies&#8221; their friends, let alone doing so without any filters, biases, and on a strict &#8220;coin flip&#8221; or probabilistic basis.  But it turns out it sure can look that way when you aggregate the results of many people imitating, choosing, learning, and adopting ideas.  So this kind of model is a good &#8220;null hypothesis&#8221; for a simplistic kind of cultural communication &#8212; anything more realistic will have to depart from this simple random model in striking, hopefully unique ways.
</p>
<p>
Being able to find unique, predictive patterns from more complex models of cultural learning and communication is possible, but not guaranteed &#8212; it is easily possible (maybe even likely) that several different kinds of social situations could lead to the same overall patterns at a local, regional, or even global level.  We call this problem &#8220;equifinality&#8221; &#8212; the data we have are insufficient to distinguish between several possible processes, so given our models and data, each process is &#8220;equally likely&#8221; to have caused the observed pattern.
</p>
<p>
This type of research is what I&#8217;ve been engaged in for a long time &#8212; at least since 1995, with conference papers, publications, and Carl Lipo&#8217;s dissertation research covering some of the results.  Now I&#8217;m extending our previous work and learning a lot of math, probability, and population genetics in the process.  It&#8217;s fascinating stuff, but in addition to the job at GridNetworks the work keeps me pretty busy.
</p>
<p>
This is all by way of explanation for my longish absences from writing something here.  I hope to remedy that, as I said, but there&#8217;s some serious work between now and then.</p>
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